PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009614316.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 436aa    MW: 48935.1 Da    PI: 4.5452
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009614316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.84.7e-32561951128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 
                     lp+G++F+Ptd+e++++ L k v   +      +  +e+i++vd    i++++P++Lp  v+++ +  +fF+++ k+y+tg+rk+r+++     +
  XP_009614316.1  56 LPRGVKFDPTDQEIIWHLLGK-VGVGNwnshpfI--DEFIPTVDeddgICYTHPQNLP-GVQQDGSVSHFFHRAVKAYNTGTRKRRKIHgdnfgD 146
                     799************766655.544443564332..334665544556**********.677788899******************865555558 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++tg++k+v+  +g + g+kk++v+y    +  k+ekt+Wvmh+y+l
  XP_009614316.1 147 VRWHKTGRTKPVIL-DGIQRGCKKIMVLYvsPIKGGKAEKTNWVMHQYHL 195
                     88************.99************6533777778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-3942214IPR003441NAC domain
PROSITE profilePS5100530.81356214IPR003441NAC domain
PfamPF023659.9E-1457195IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MNRPSWLVDS KRIATKIKSA SGDPGAVNWK SNPTKACPNC QFIIDNNDVS NDWPGLPRGV  60
KFDPTDQEII WHLLGKVGVG NWNSHPFIDE FIPTVDEDDG ICYTHPQNLP GVQQDGSVSH  120
FFHRAVKAYN TGTRKRRKIH GDNFGDVRWH KTGRTKPVIL DGIQRGCKKI MVLYVSPIKG  180
GKAEKTNWVM HQYHLGTGED EREGEYVVSK VFYQQQQQVK QGEKIEEELP EDSECLVAKV  240
DPHTPKSVTP EPPCGERLSS SMDARQQIAA SGINPITQFH DVDYIEDDMR ALPEQTENQD  300
QIIENQIDET GTKVDNETGD DPKWWDSESQ YLLDSQQLVE GLSLCDDLLA SQSPNRDGNE  360
NDKENSKPSL ADYAQLGPED LKKDLEECQH LVLDPANIDM DTPPDFRLSQ LDFGSQDSYI  420
AWGGSKFGFD SGEHGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754441e-178HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009614316.10.0PREDICTED: NAC domain-containing protein 8 isoform X3
SwissprotQ6NQK20.0NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0ZJN30.0M0ZJN3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000021220.0(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-169NAC family protein